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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20418317_20418989_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20418317 - 20418989

Intron Length:

673

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGTGTAAA

5'SS Class:

major

3'SS Sequence:

TTCTCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTGAT

U12 Branch Point Sequence:

TTGATGCTAACC

Flanking Amino Acid:

GNYDAFFFHPNTYRCARLAV

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

72.3

Major BPS

70.8

0.52

1.2

63.4

44.3

Major PPT

92.7

0.96

0.6

91.8

19.2

Minor 5ss

36.2

-1.6

2.6

42.1

44.8

Minor BPS

46.1

-0.3

2.3

63.21

42.3

Associated Gene:

Gene:

HDAC10

Ensembl Gene ID:

ENSAPLG00000003588

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003723

20404310 - 20422307

17998