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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20428148_20431011_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20428148 - 20431011

Intron Length:

2864

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGCTGTGC

5'SS Class:

weak_major

3'SS Sequence:

CAGGGCTCACTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTTGAC

U12 Branch Point Sequence:

TGTTTGGCAACC

Flanking Amino Acid:

HPSVPQVPAKKMLLMAKILV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.3

0.1

1.1

47.6

37.7

Major BPS

68.7

0.47

1.2

63.1

44.5

Major PPT

50.2

40.7

39.1

Minor 5ss

32.3

-2

3.4

40.7

43.8

Minor BPS

42.8

-0.5

2.6

62.67

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004018

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004124

20427018 - 20431068

4051