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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20446504_20447648_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20446504 - 20447648

Intron Length:

1145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGACAC

5'SS Class:

strong_major

3'SS Sequence:

TGCCGTTCGCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

ATGATTTGAATG

Flanking Amino Acid:

ASVLKYANPLAVSLLEKMLV

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

40.1

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

60.6

0.24

41.5

Minor 5ss

31.8

-2.1

3.1

34.5

41.3

Minor BPS

48.4

-0.2

1.5

50.56

38.1

Associated Gene:

Gene:

MAPK12

Ensembl Gene ID:

ENSAPLG00000004157

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004282

20445328 - 20477274

31947