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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20448547_20450713_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

20448547 - 20450713

Intron Length:

2167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATC|GTATCCTTC

5'SS Class:

strong_minor

3'SS Sequence:

TTCTGGGATTCAG|A

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

TGTTCCTTATTT

Flanking Amino Acid:

TGRPLFKGNDHLDQLTEIMK

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

47.9

-0.1

1.4

49.4

42.4

Major BPS

78.8

0.72

67.9

40.1

Major PPT

69.1

0.43

1.1

65.6

44.6

Minor 5ss

90.3

1.36

0.9

24.7

Minor BPS

75.6

0.88

1.5

88.81

36.2

Associated Gene:

Gene:

MAPK12

Ensembl Gene ID:

ENSAPLG00000004157

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004282

20445328 - 20477274

31947