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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20476657_20477158_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20476657 - 20477158

Intron Length:

502

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

CCGCTCCCCGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCACCAA

U12 Branch Point Sequence:

TCCCCGCTCACC

Flanking Amino Acid:

PVGSGAYGAVCSAVDGRTGT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.57

55.8

43.4

Major BPS

47.5

-0.1

1.3

40.2

Major PPT

56.5

0.15

27.9

Minor 5ss

30.4

-2.2

3.3

34.5

43.8

Minor BPS

-0.8

2.5

52.17

45.2

Associated Gene:

Gene:

MAPK12

Ensembl Gene ID:

ENSAPLG00000004157

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004282

20445328 - 20477274

31947