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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20559860_20562501_R

Intron Information:

Intron Rank:

136779

Intron Class:

major

Intron Phase:

Intron Coordinates:

20559860 - 20562501

Intron Length:

2642

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCAACA

5'SS Class:

major

3'SS Sequence:

ATTCTTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTAATCCTACTA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.9

0.45

1.2

65.5

40.4

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

86.2

0.81

0.7

85.3

28.6

Minor 5ss

38.2

-1.3

3.1

50.6

45.4

Minor BPS

46.9

-0.2

1.9

61.19

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021079

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027744

20559161 - 20562815

3655