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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20586328_20586856_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20586328 - 20586856

Intron Length:

529

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTGAT

5'SS Class:

major

3'SS Sequence:

TATATTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

TTTCTCTCTATT

Flanking Amino Acid:

CTRTEHKLSRDSPSNKLLYA

Intron Amino Acid Position:

1740

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

75.1

35.1

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

87.1

0.84

0.8

35.1

Minor 5ss

35.6

-1.6

3.3

45.6

43.6

Minor BPS

53.3

0.18

1.8

77.39

38.9

Associated Gene:

Gene:

PLXNB2

Ensembl Gene ID:

ENSAPLG00000004968

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005223

20579775 - 20824641

244867