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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20594677_20595580_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20594677 - 20595580

Intron Length:

904

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGGAGG

5'SS Class:

major

3'SS Sequence:

TGTATTTTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTCTTTTGAATA

Flanking Amino Acid:

KRINTLMHYNVRDGATLILS

Intron Amino Acid Position:

1557

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

66.4

44.7

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

69.8

0.45

1.1

70.5

39.1

Minor 5ss

34.1

-1.8

3.2

44.3

43.6

Minor BPS

63.6

0.42

1.4

71.08

35.7

Associated Gene:

Gene:

PLXNB2

Ensembl Gene ID:

ENSAPLG00000004968

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005223

20579775 - 20824641

244867