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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20595682_20596699_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20595682 - 20596699

Intron Length:

1018

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGTAGC

5'SS Class:

major

3'SS Sequence:

AATTGCTCCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTCTCATTT

Flanking Amino Acid:

QWPKAESVALEWRPGSTAQI

Intron Amino Acid Position:

1523

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

68.8

42.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

66.8

0.38

0.9

63.4

38.5

Minor 5ss

34.8

-1.7

42.1

39.8

Minor BPS

62.3

0.47

1.8

83.64

37.8

Associated Gene:

Gene:

PLXNB2

Ensembl Gene ID:

ENSAPLG00000004968

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005223

20579775 - 20824641

244867