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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20606641_20607138_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20606641 - 20607138

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATCAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCTGTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAC

U12 Branch Point Sequence:

TTTGCCATAATA

Flanking Amino Acid:

KQVNKLINAKGSNLNKAMTI

Intron Amino Acid Position:

1123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

76.5

34.2

Major BPS

70.1

0.5

70.3

31.9

Major PPT

77.1

0.61

0.9

70.5

40.6

Minor 5ss

32.9

-2

40.7

45.5

Minor BPS

0.56

1.7

80.21

35.9

Associated Gene:

Gene:

PLXNB2

Ensembl Gene ID:

ENSAPLG00000004968

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005223

20579775 - 20824641

244867