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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20624371_20627392_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20624371 - 20627392

Intron Length:

3022

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATCACT

5'SS Class:

strong_major

3'SS Sequence:

TATTTCCCGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

TAAACTTGCATT

Flanking Amino Acid:

FKEEFYSVSTRIVCQVGRMD

Intron Amino Acid Position:

872

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

77.3

37.6

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

69.4

0.44

63.6

39.1

Minor 5ss

42.1

-0.9

2.9

59.1

Minor BPS

46.2

-0.2

1.9

63.66

40.6

Associated Gene:

Gene:

PLXNB2

Ensembl Gene ID:

ENSAPLG00000004968

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005223

20579775 - 20824641

244867