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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20627542_20629897_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20627542 - 20629897

Intron Length:

2356

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTAAGATAG

5'SS Class:

major

3'SS Sequence:

CATGCAAACACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

VTCPPPEITRIEPKTGPLSG

Intron Amino Acid Position:

823

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.1

61.6

39.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

56.1

0.14

47.7

38.2

Minor 5ss

39.3

-1.2

3.1

48.2

47.3

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

PLXNB2

Ensembl Gene ID:

ENSAPLG00000004968

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005223

20579775 - 20824641

244867