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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20641900_20644121_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20641900 - 20644121

Intron Length:

2222

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTGTGATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTAGAT

U12 Branch Point Sequence:

ACTTAGATAACT

Flanking Amino Acid:

KVIPPTPEGQDHVSVPLRLT

Intron Amino Acid Position:

600

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.3

32.6

Major BPS

66.8

0.42

1.1

64.4

41.8

Major PPT

74.2

0.55

72.1

Minor 5ss

30.9

-2.2

3.2

46.4

Minor BPS

47.2

-0.1

2.4

72.37

44.1

Associated Gene:

Gene:

PLXNB2

Ensembl Gene ID:

ENSAPLG00000004968

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005223

20579775 - 20824641

244867