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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20646224_20648371_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20646224 - 20648371

Intron Length:

2148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CCTATTTTGTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATAAT

U12 Branch Point Sequence:

TTGTTCCTATTT

Flanking Amino Acid:

PYCGWCVREGRCTKRADCET

Intron Amino Acid Position:

507

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

80.5

33.9

Major BPS

75.5

0.63

1.1

34.4

Major PPT

76.2

0.59

76.1

37.8

Minor 5ss

31.4

-2.1

2.9

42.1

44.5

Minor BPS

53.4

0.18

1.9

75.86

41.4

Associated Gene:

Gene:

PLXNB2

Ensembl Gene ID:

ENSAPLG00000004968

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005223

20579775 - 20824641

244867