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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20652427_20653420_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20652427 - 20653420

Intron Length:

994

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTCCATGAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTCCAT

U12 Branch Point Sequence:

TCTTCCATGAAA

Flanking Amino Acid:

LGTSDGKILKVFLSSTATEY

Intron Amino Acid Position:

433

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

1.1

80.7

33.7

Major BPS

0.37

1.3

76.1

Major PPT

62.9

0.29

1.1

58.2

40.9

Minor 5ss

40.7

-1

57.6

46.6

Minor BPS

59.9

0.31

1.8

72.76

38.8

Associated Gene:

Gene:

PLXNB2

Ensembl Gene ID:

ENSAPLG00000004968

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005223

20579775 - 20824641

244867