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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20653604_20655284_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20653604 - 20655284

Intron Length:

1681

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAATATCA

5'SS Class:

major

3'SS Sequence:

TATTCCTTATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

TATTCCTTATTA

Flanking Amino Acid:

VENPCGSHGLNASKNFPCGS

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

33.8

Major BPS

0.52

1.1

77.7

35.3

Major PPT

75.4

0.57

0.9

75.3

34.1

Minor 5ss

38.4

-1.3

45.9

44.1

Minor BPS

73.9

0.74

1.5

80.63

35.2

Associated Gene:

Gene:

PLXNB2

Ensembl Gene ID:

ENSAPLG00000004968

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005223

20579775 - 20824641

244867