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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20692279_20754031_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

20692279 - 20754031

Intron Length:

61753

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCTTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTATTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATAGTTTTAATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.9

78.8

38.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.5

0.78

0.8

85.3

28.3

Minor 5ss

47.5

-0.2

2.8

64.1

47.4

Minor BPS

60.9

0.32

1.3

64.51

35.6

Associated Gene:

Gene:

PLXNB2

Ensembl Gene ID:

ENSAPLG00000004968

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005223

20579775 - 20824641

244867