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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20928036_20954612_R

Intron Information:

Intron Rank:

149811

Intron Class:

major

Intron Phase:

Intron Coordinates:

20928036 - 20954612

Intron Length:

26577

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATATAAA

5'SS Class:

strong_major

3'SS Sequence:

AACTGTGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

TGTTTCAGAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

78.3

30.6

Major BPS

77.3

0.68

81.5

Major PPT

69.2

0.43

60.9

Minor 5ss

40.5

-1.1

2.7

50.4

46.1

Minor BPS

52.4

0.15

1.8

76.14

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028168

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029153

20927442 - 20955362

27921