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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20973580_20975720_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20973580 - 20975720

Intron Length:

2141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

AAAATAATACCT

Flanking Amino Acid:

YCPPSLQMDDNLPDINDKQS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

83.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

1.1

0.4

13.8

Minor 5ss

-0.2

2.8

68.9

36.6

Minor BPS

40.6

-0.6

1.9

55.52

39.5

Associated Gene:

Gene:

ZNF800

Ensembl Gene ID:

ENSAPLG00000014433

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015031

20968184 - 20978777

10594

ENSAPLT00000021026

20968184 - 21016478

48295