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Intron Name: Anas_platyrhynchos_platyrhynchos_1_21016656_21022977_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

21016656 - 21022977

Intron Length:

6322

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTGTG

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTCTTTTTTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

70.7

39.5

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

42.5

-0.8

3.1

57.9

46.8

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

GRM8

Ensembl Gene ID:

ENSAPLG00000013904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014497

21016400 - 21376849

360450