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Intron Name: Anas_platyrhynchos_platyrhynchos_1_21233563_21309864_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21233563 - 21309864

Intron Length:

76302

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TAATATTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTTTTTTAATA

Flanking Amino Acid:

LTYIRAVNFNGSAGTPVIFN

Intron Amino Acid Position:

453

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.2

28.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.6

0.69

0.9

77.6

40.8

Minor 5ss

40.6

-1

2.8

49.4

41.4

Minor BPS

76.4

0.82

79.24

30.7

Associated Gene:

Gene:

GRM8

Ensembl Gene ID:

ENSAPLG00000013904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014497

21016400 - 21376849

360450