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Intron Name: Anas_platyrhynchos_platyrhynchos_1_215602_231520_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

215602 - 231520

Intron Length:

15919

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

GCCTCTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTAAT

U12 Branch Point Sequence:

GGGTAGCTAATG

Flanking Amino Acid:

IIKTHKESDVVPFRETPSYT

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

76.6

34.9

Major BPS

70.5

0.51

1.1

69.7

35.5

Major PPT

81.5

0.71

0.8

75.7

32.7

Minor 5ss

38.5

-1.3

2.9

46.1

43.6

Minor BPS

39.1

-0.9

2.3

42.62

42.3

Associated Gene:

Gene:

SHANK3

Ensembl Gene ID:

ENSAPLG00000008650

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009009

4776 - 289936

285161

ENSAPLT00000009001

4776 - 289936

285161