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Intron Name: Anas_platyrhynchos_platyrhynchos_1_2201922_2205231_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2201922 - 2205231

Intron Length:

3310

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGGAAC

5'SS Class:

major

3'SS Sequence:

TCTTTGCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

CCTTCTTTGCTT

Flanking Amino Acid:

NISVSQYNVLLVLETYNVPE

Intron Amino Acid Position:

574

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

0.9

70.9

34.5

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

86.2

0.81

0.8

80.6

31.4

Minor 5ss

27.3

-2.6

30.7

36.9

Minor BPS

44.2

-0.3

3.4

69.68

42.6

Associated Gene:

Gene:

PLXNA4

Ensembl Gene ID:

ENSAPLG00000016282

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017012

1929223 - 2304766

375544