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Intron Name: Anas_platyrhynchos_platyrhynchos_1_22038470_22042653_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

22038470 - 22042653

Intron Length:

4184

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTGCT

5'SS Class:

major

3'SS Sequence:

GAAATGGTTTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TACATATTAATT

Flanking Amino Acid:

VKLHCSKCNSLQEVPNGDAF

Intron Amino Acid Position:

526

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

73.6

35.1

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

56.5

0.15

1.1

47.4

Minor 5ss

37.9

-1.4

3.3

56.6

41.9

Minor BPS

56.2

0.27

1.6

70.65

40.3

Associated Gene:

Gene:

POT1

Ensembl Gene ID:

ENSAPLG00000016011

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016726

21980581 - 22053919

73339