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Intron Name: Anas_platyrhynchos_platyrhynchos_1_2247496_2249176_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2247496 - 2249176

Intron Length:

1681

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGAGG

5'SS Class:

major

3'SS Sequence:

CTTCTGCTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTTACATTTACT

Flanking Amino Acid:

TFGRQPCLFYRRSTKHIVCN

Intron Amino Acid Position:

995

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.1

57.8

46.6

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

78.1

0.63

0.8

71.8

32.8

Minor 5ss

29.9

-2.3

3.3

39.8

45.8

Minor BPS

63.3

0.5

86.77

38.3

Associated Gene:

Gene:

PLXNA4

Ensembl Gene ID:

ENSAPLG00000016282

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017012

1929223 - 2304766

375544