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Intron Name: Anas_platyrhynchos_platyrhynchos_1_22525197_22526420_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
22525197 - 22526420

Intron Length:
1224

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGTGTC

5'SS Class:
strong_major

3'SS Sequence:
TTTTTTTTTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTCAA

U12 Branch Point Sequence:
TGTTTTCAAATC

Flanking Amino Acid:
SYFIRIYDIKDGKLLWEQEL

Intron Amino Acid Position:
86

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
97
1.11
0.7
88.7
23.8

Major BPS
90.8
1.01
0.7
91.9
19.6

Major PPT
100
1.12
0.4
100
0

Minor 5ss
37.2
-1.4
3.3
52
45.2

Minor BPS
47.9
-0.1
1.9
62.75
37.3

Associated Gene:

Gene:
WASL

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22499983 - 22546737
46755

22499983 - 22546737
46755