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Intron Name: Anas_platyrhynchos_platyrhynchos_1_22526508_22527054_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
22526508 - 22527054

Intron Length:
547

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAT|GTGAGTCTC

5'SS Class:
major

3'SS Sequence:
TAATGTTTTTCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TATTAAT

U12 Branch Point Sequence:
GGGATATTAATG

Flanking Amino Acid:
RGYFHTFAGDTCQVGLNFAN

Intron Amino Acid Position:
115

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.5
0.7
1
74.3
36.2

Major BPS
91.8
1.04
0.7
90.2
19.3

Major PPT
80.4
0.68
0.9
77.3
41.3

Minor 5ss
35.8
-1.6
3.1
49.2
40.2

Minor BPS
47
-0.3
1.7
46.54
40.1

Associated Gene:

Gene:
WASL

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22499983 - 22546737
46755

22499983 - 22546737
46755