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Intron Name: Anas_platyrhynchos_platyrhynchos_1_22537048_22539738_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
22537048 - 22539738

Intron Length:
2691

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCA|GTAAGGACT

5'SS Class:
major

3'SS Sequence:
TCTGCTTTTTTAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAC

U12 Branch Point Sequence:
TTTACTCTGATT

Flanking Amino Acid:
KADIGTPSNFQHIGHVGWDP

Intron Amino Acid Position:
211

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.3
0.53
1.1
70.2
40

Major BPS
86.6
0.91
0.8
77.7
36.7

Major PPT
82.2
0.73
0.8
80.7
31.3

Minor 5ss
37.1
-1.5
3.3
55.8
42.2

Minor BPS
58.9
0.36
1.7
80.44
35.4

Associated Gene:

Gene:
WASL

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22499983 - 22546737
46755

22499983 - 22546737
46755