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Intron Name: Anas_platyrhynchos_platyrhynchos_1_2255101_2256877_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2255101 - 2256877

Intron Length:

1777

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

TTTCTCTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCATAAA

U12 Branch Point Sequence:

TTGTCCATAAAC

Flanking Amino Acid:

AKHGGKEHVNNCEVQNSTEM

Intron Amino Acid Position:

1083

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

1.2

86.9

30.1

Major BPS

53.7

0.09

1.1

55.9

35.8

Major PPT

84.4

0.77

0.7

77.3

31.4

Minor 5ss

37.6

-1.4

50.6

39.2

Minor BPS

65.9

0.48

1.7

76.97

38.6

Associated Gene:

Gene:

PLXNA4

Ensembl Gene ID:

ENSAPLG00000016282

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017012

1929223 - 2304766

375544