About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_22584981_22585357_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
22584981 - 22585357

Intron Length:
377

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCT|GTGAGTATG

5'SS Class:
major

3'SS Sequence:
CACTGTTTTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTAAT

U12 Branch Point Sequence:
ATTTTCTTCACT

Flanking Amino Acid:
IHKAAYEGHYLVLKYLIPVT

Intron Amino Acid Position:
293

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72
0.52
1.1
71.2
40.3

Major BPS
91.8
1.04
0.7
90.2
19.3

Major PPT
75.3
0.57
0.9
72.8
37.2

Minor 5ss
36.8
-1.5
2.9
52.3
44.3

Minor BPS
73.5
0.82
1.7
89.83
34.4

Associated Gene:

Gene:
ASB15

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22582374 - 22594257
11884

22582374 - 22594257
11884