Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_22608960_22612645_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22608960 - 22612645

Intron Length:

3686

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTATACCTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

AATACCTAAAAC

Flanking Amino Acid:

DFELLYHALESWRQEEIERI

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

89.9

23.2

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

77.1

0.61

0.8

71.5

34.4

Minor 5ss

48.6

-0.1

2.8

71.8

38.1

Minor BPS

53.9

0.1

1.8

64.52

40.3

Associated Gene:

Gene:

IQUB

Ensembl Gene ID:

ENSAPLG00000014571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018751

22604802 - 22625616

20815

ENSAPLT00000015201

22604802 - 22628199

23398