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Intron Name: Anas_platyrhynchos_platyrhynchos_1_22612822_22617678_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22612822 - 22617678

Intron Length:

4857

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTGTTTCTGAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

CAGTTTATAATA

Flanking Amino Acid:

HKAVLHFLSKCAQPKRWKAY

Intron Amino Acid Position:

356

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

1.2

83.2

30.8

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

71.9

0.49

1.1

72.4

37.4

Minor 5ss

30.5

-2.2

2.5

33.7

41.5

Minor BPS

49.4

-0

1.6

56.24

37.6

Associated Gene:

Gene:

IQUB

Ensembl Gene ID:

ENSAPLG00000014571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018751

22604802 - 22625616

20815

ENSAPLT00000015201

22604802 - 22628199

23398