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Intron Name: Anas_platyrhynchos_platyrhynchos_1_2263991_2266764_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2263991 - 2266764

Intron Length:

2774

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCATACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

AAGGTATAAACT

Flanking Amino Acid:

EDHPVLRDLEVPGYRQERVE

Intron Amino Acid Position:

1338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

82.4

29.8

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

0.72

0.8

76.9

30.8

Minor 5ss

41.2

-1

2.9

57.1

47.2

Minor BPS

45.3

-0.2

1.9

59.96

43.5

Associated Gene:

Gene:

PLXNA4

Ensembl Gene ID:

ENSAPLG00000016282

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017012

1929223 - 2304766

375544