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Intron Name: Anas_platyrhynchos_platyrhynchos_1_2267034_2269483_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2267034 - 2269483

Intron Length:

2450

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGATA

5'SS Class:

strong_major

3'SS Sequence:

GGTCTGATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TCATTTTTGATT

Flanking Amino Acid:

SKNHPKLLLRRTESVAEKML

Intron Amino Acid Position:

1427

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

81.1

32.6

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

67.1

0.39

62.9

Minor 5ss

35.2

-1.7

3.3

48.1

47.6

Minor BPS

0.55

1.1

74.24

37.4

Associated Gene:

Gene:

PLXNA4

Ensembl Gene ID:

ENSAPLG00000016282

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017012

1929223 - 2304766

375544