Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_22781307_22781943_R

Intron Information:

Intron Rank:

141156

Intron Class:

major

Intron Phase:

Intron Coordinates:

22781307 - 22781943

Intron Length:

637

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTTAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTTGTGTTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

36.6

Major BPS

88.7

0.96

0.8

36.5

Major PPT

77.8

0.63

73.3

40.9

Minor 5ss

29.1

-2.4

3.2

37.3

42.5

Minor BPS

61.8

0.37

2.1

78.35

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042423

22779940 - 22791181

11242