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Intron Name: Anas_platyrhynchos_platyrhynchos_1_22796478_22797708_F

Intron Information:

Intron Rank:

140004

Intron Class:

major

Intron Phase:

Intron Coordinates:

22796478 - 22797708

Intron Length:

1231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGGAC

5'SS Class:

major

3'SS Sequence:

TTGTCTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTGTCTTTCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

60.9

38.2

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

84.2

0.77

0.8

79.7

32.4

Minor 5ss

27.8

-2.5

3.7

40.2

46.2

Minor BPS

68.9

0.59

1.7

78.71

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025257

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043287

22794080 - 22799687

5608

ENSAPLT00000041518

22793527 - 22799687

6161

ENSAPLT00000019281

22792778 - 22799687

6910