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Intron Name: Anas_platyrhynchos_platyrhynchos_1_2282743_2285391_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2282743 - 2285391

Intron Length:

2649

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAC

U12 Branch Point Sequence:

AGCTTGTTGACA

Flanking Amino Acid:

KRLNTLAHYQVPDGSVVALV

Intron Amino Acid Position:

1587

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

1.1

72.3

39.5

Major BPS

71.3

0.53

1.1

63.1

44.5

Major PPT

89.1

0.88

0.6

85.8

21.3

Minor 5ss

37.6

-1.4

3.2

48.7

47.5

Minor BPS

49.1

-0

2.1

60.48

39.6

Associated Gene:

Gene:

PLXNA4

Ensembl Gene ID:

ENSAPLG00000016282

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017012

1929223 - 2304766

375544