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Intron Name: Anas_platyrhynchos_platyrhynchos_1_23098071_23101487_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23098071 - 23101487

Intron Length:

3417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAACAA

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGCAT

U12 Branch Point Sequence:

ATGTTGTGCATT

Flanking Amino Acid:

KEIISLLVSKVVSVLEGVLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

70.2

35.7

Major BPS

59.8

0.25

1.5

71.4

45.1

Major PPT

82.3

0.73

0.8

73.6

Minor 5ss

30.6

-2.2

3.1

38.6

46.4

Minor BPS

41.6

-0.5

2.4

62.1

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031194

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032541

23094637 - 23133702

39066