Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_23141888_23142190_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23141888 - 23142190

Intron Length:

303

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAACATT

5'SS Class:

major

3'SS Sequence:

CTCCCCCCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAAAAAC

U12 Branch Point Sequence:

TTTCTCTCCCCC

Flanking Amino Acid:

LCRHKIIHTQEKPHKCNQCG

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.69

0.9

80.2

34.3

Major BPS

46.3

-0.2

29.8

Major PPT

68.4

0.41

0.7

65.8

23.2

Minor 5ss

39.2

-1.2

3.2

56.9

47.4

Minor BPS

37.6

-0.9

3.6

63.43

42.2

Associated Gene:

Gene:

FEZF1

Ensembl Gene ID:

ENSAPLG00000015055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015683

23140808 - 23143705

2898