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Intron Name: Anas_platyrhynchos_platyrhynchos_1_23170301_23171087_R

Intron Information:

Intron Rank:

138579

Intron Class:

major

Intron Phase:

Intron Coordinates:

23170301 - 23171087

Intron Length:

787

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGCCTT

5'SS Class:

major

3'SS Sequence:

TTTCTGTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAA

U12 Branch Point Sequence:

AATATATAAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.3

72.7

44.5

Major BPS

69.8

0.49

70.3

31.8

Major PPT

84.4

0.77

0.8

79.4

32.6

Minor 5ss

39.2

-1.2

3.2

56.8

47.3

Minor BPS

47.6

-0.2

1.9

59.77

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035448

23166865 - 23171343

4479