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Intron Name: Anas_platyrhynchos_platyrhynchos_1_23221253_23222540_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23221253 - 23222540

Intron Length:

1288

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGAGTA

5'SS Class:

major

3'SS Sequence:

TGCTTTCTAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

TGCTTTCTAACA

Flanking Amino Acid:

MITNLVEKGRRKCDQYWPAE

Intron Amino Acid Position:

963

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

67.8

37.5

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

77.4

0.62

0.9

73.3

Minor 5ss

39.7

-1.2

3.4

48.4

Minor BPS

57.9

0.24

1.7

68.01

38.6

Associated Gene:

Gene:

PTPRZ1

Ensembl Gene ID:

ENSAPLG00000015904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025932

23209445 - 23346496

137052

ENSAPLT00000045597

23209445 - 23346496

137052

ENSAPLT00000024915

23209445 - 23346496

137052

ENSAPLT00000037641

23209445 - 23346496

137052

ENSAPLT00000016617

23209445 - 23346496

137052

ENSAPLT00000029434

23209445 - 23346496

137052

ENSAPLT00000026434

23209445 - 23248589

39145