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Intron Name: Anas_platyrhynchos_platyrhynchos_1_23222676_23227880_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23222676 - 23227880

Intron Length:

5205

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TATTTCAATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TATATTTCAATT

Flanking Amino Acid:

ASNGFSEEFEGYNKPKAYIA

Intron Amino Acid Position:

522

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

69.5

41.1

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

73.8

0.54

0.9

72.2

37.7

Minor 5ss

41.4

-1

3.3

58.6

46.2

Minor BPS

57.6

0.32

1.5

73.64

37.5

Associated Gene:

Gene:

PTPRZ1

Ensembl Gene ID:

ENSAPLG00000015904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024915

23209445 - 23346496

137052