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Intron Name: Anas_platyrhynchos_platyrhynchos_1_23574641_23575739_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23574641 - 23575739

Intron Length:

1099

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCATTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTTGTAAAACT

Flanking Amino Acid:

KMEANLGHIFARSALDAAAR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.1

0.79

0.8

82.2

34.1

Minor 5ss

34.5

-1.8

3.3

45.9

43.7

Minor BPS

46.9

-0.1

2.3

45.3

Associated Gene:

Gene:

FAM3C

Ensembl Gene ID:

ENSAPLG00000016245

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016959

23571926 - 23586820

14895