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Intron Name: Anas_platyrhynchos_platyrhynchos_1_23628819_23632894_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23628819 - 23632894

Intron Length:

4076

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

ACTTCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCACAT

U12 Branch Point Sequence:

ATTCACATATGT

Flanking Amino Acid:

RGKCGCHFHEVVKSNPSEES

Intron Amino Acid Position:

984

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

77.7

0.69

83.3

27.7

Major PPT

0.81

0.7

80.6

30.6

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

43.2

-0.4

2.2

66.19

43.7

Associated Gene:

Gene:

CPED1

Ensembl Gene ID:

ENSAPLG00000000584

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017083

23628591 - 23772611

144021

ENSAPLT00000000864

23626999 - 23772611

145613

ENSAPLT00000028891

23626999 - 23772611

145613

ENSAPLT00000024397

23626999 - 23772611

145613