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Intron Name: Anas_platyrhynchos_platyrhynchos_1_23696357_23698197_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23696357 - 23698197

Intron Length:

1841

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTGGAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

CTTCTTGGAACA

Flanking Amino Acid:

SKNKERQCSYDKDTLSHIRQ

Intron Amino Acid Position:

594

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

75.9

35.2

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

68.5

0.42

1.1

64.9

40.1

Minor 5ss

33.7

-1.9

2.9

Minor BPS

45.9

-0.3

2.1

60.67

39.7

Associated Gene:

Gene:

CPED1

Ensembl Gene ID:

ENSAPLG00000000584

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024397

23626999 - 23772611

145613

ENSAPLT00000000864

23626999 - 23772611

145613

ENSAPLT00000028891

23626999 - 23772611

145613