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Intron Name: Anas_platyrhynchos_platyrhynchos_1_23696357_23698579_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23696357 - 23698579

Intron Length:

2223

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTGGAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

CTTCTTGGAACA

Flanking Amino Acid:

VPFNLRKNHEDKDTLSHIRQ

Intron Amino Acid Position:

559

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.5

0.8

87.7

27.9

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

68.5

0.42

1.1

64.9

40.1

Minor 5ss

33.9

-1.8

3.3

47.8

47.9

Minor BPS

45.9

-0.3

2.1

60.67

39.7

Associated Gene:

Gene:

CPED1

Ensembl Gene ID:

ENSAPLG00000000584

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017083

23628591 - 23772611

144021