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Intron Name: Anas_platyrhynchos_platyrhynchos_1_23698648_23700926_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23698648 - 23700926

Intron Length:

2279

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGAATT

5'SS Class:

strong_major

3'SS Sequence:

ATTGAATTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

TGCTATTGAATT

Flanking Amino Acid:

SIIIMNWLQLRNSSQENARP

Intron Amino Acid Position:

556

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.7

89.7

22.4

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

64.7

0.33

1.1

58.4

45.7

Minor 5ss

-1.8

3.2

48.5

47.2

Minor BPS

54.2

0.21

1.6

70.4

40.8

Associated Gene:

Gene:

CPED1

Ensembl Gene ID:

ENSAPLG00000000584

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028891

23626999 - 23772611

145613

ENSAPLT00000000864

23626999 - 23772611

145613