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Intron Name: Anas_platyrhynchos_platyrhynchos_1_23698648_23702966_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23698648 - 23702966

Intron Length:

4319

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGATAG

5'SS Class:

strong_major

3'SS Sequence:

ATTGAATTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

TGCTATTGAATT

Flanking Amino Acid:

TKEAHTNLSEWNSSQENARP

Intron Amino Acid Position:

536

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

70.4

36.3

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

64.7

0.33

1.1

58.4

45.7

Minor 5ss

37.4

-1.4

44.2

44.6

Minor BPS

54.2

0.21

1.6

70.4

40.8

Associated Gene:

Gene:

CPED1

Ensembl Gene ID:

ENSAPLG00000000584

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024397

23626999 - 23772611

145613

ENSAPLT00000017083

23628591 - 23772611

144021