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Intron Name: Anas_platyrhynchos_platyrhynchos_1_23700987_23702966_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23700987 - 23702966

Intron Length:

1980

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGATAG

5'SS Class:

strong_major

3'SS Sequence:

ATTCCTCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTGAA

U12 Branch Point Sequence:

ACTCTCTGAATT

Flanking Amino Acid:

TKEAHTNLSEWRSKKSSRNS

Intron Amino Acid Position:

536

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

70.4

36.3

Major BPS

64.3

0.35

1.2

55.4

Major PPT

75.9

0.58

0.8

69.5

30.6

Minor 5ss

37.4

-1.4

44.2

44.6

Minor BPS

60.1

0.39

1.4

72.32

38.7

Associated Gene:

Gene:

CPED1

Ensembl Gene ID:

ENSAPLG00000000584

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028891

23626999 - 23772611

145613

ENSAPLT00000000864

23626999 - 23772611

145613