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Intron Name: Anas_platyrhynchos_platyrhynchos_1_23705738_23708117_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23705738 - 23708117

Intron Length:

2380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTCTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

TGTTCTCTAACA

Flanking Amino Acid:

STSLHPVVLEVHENFDFQDE

Intron Amino Acid Position:

389

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.7

88.4

18.8

Major BPS

73.5

0.59

81.3

29.9

Major PPT

78.3

0.64

0.9

73.9

35.6

Minor 5ss

29.6

-2.3

2.6

32.7

42.2

Minor BPS

70.5

0.64

1.6

81.02

34.1

Associated Gene:

Gene:

CPED1

Ensembl Gene ID:

ENSAPLG00000000584

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017083

23628591 - 23772611

144021

ENSAPLT00000000864

23626999 - 23772611

145613

ENSAPLT00000028891

23626999 - 23772611

145613

ENSAPLT00000024397

23626999 - 23772611

145613